Biology · Unit 7: Ecosystems

The Chesapeake Under Pressure

How can fertilizer on a field far upstream leave the deep water of the Chesapeake Bay short of oxygen, and what can people do about it? You follow nutrients from land to the Bay, test fixes in a watershed model, and read real Bay data on nitrogen, low oxygen and underwater grass. Afterwards you can explain eutrophication step by step and plan and judge a fix for a Virginia watershed.

Where this lesson sits

  • Virginia SOL BIO.8d
  • Practices BIO.1a, BIO.1b, BIO.1c, BIO.1d, BIO.1e, BIO.1f

Essential question: How do human actions change ecosystems, and what can we do about it in our own watershed?

  1. Life Science (grade 7) LS.9 a-c and LS.8 c

    Review it at grade 7 level

    In Life Science you learned that people change ecosystems through habitat destruction, pollution, invasive species and climate change, and that ocean water is becoming more acidic. You also learned that not all human impacts are negative, because people can protect and restore habitats. An ecosystem may recover after a disturbance, depending on how severe it was and how resilient the ecosystem is. Chesapeake Bay blue crabs and menhaden were one Virginia example. Biology adds the step-by-step chain of eutrophication, real Bay data, and how to design and test a fix for a watershed.

  2. Biology BIO.8d You are here

    This lesson

  3. Biology II Biology II: Ecology, EC.2 d and f, EC.7 c; Advanced Topics, BIOII.6 f

    Preview where it goes next

    Virginia's Biology II Ecology course pairs each threat from people with ways to remediate it. It adds the laws and agreements behind conservation, such as the Endangered Species Act of 1973 and the United Nations Convention on Biological Diversity, and has you run a biosurvey of a local area. It studies invasive species in a local ecosystem, which this lesson left out. The Advanced Topics course adds ecosystem services: the clean water, fisheries, flood control and other benefits people get from working ecosystems. Those services give a way to weigh the cost of a buffer or a reef against what the Bay gives back.

  4. College

Watch first Bacteria, Not Fertilizer, Use the Oxygen · 3:03

Supports

Supports change how much help you get, not what you learn.

Each summer, water near the bottom of the Chesapeake Bay’s deep channel typically holds too little oxygen for crabs and fish to stay. People call it a dead zone, and part of what feeds it washes in from farms, lawns, wastewater plants and even the air.

No one pours in a chemical that soaks up oxygen. So how can fertilizer far up the James River take oxygen from the Bay’s floor, and can people fix it?

What do you think? Decide before you read.

  1. Human activities do not significantly affect the environment.

    Scientists disagree: Scientists measure nutrients in Bay water and the rivers that feed it. A 2018 study found that nitrogen in Bay water fell about 23 percent after 1984 as pollution was cut, and underwater grass regained about 17,000 hectares. Human choices moved those numbers.

    What scientists think

    Scientists disagree: Scientists measure nutrients in Bay water and the rivers that feed it. A 2018 study found that nitrogen in Bay water fell about 23 percent after 1984 as pollution was cut, and underwater grass regained about 17,000 hectares. Human choices moved those numbers.

  2. What people do on land does not affect rivers and bays.

    Scientists disagree: Rain washes lawn fertilizer and manure into streams, wastewater plants release treated water into rivers, and air pollution drops nitrogen onto land and water. Stream gauges and water samples track these nutrients downstream to the Bay.

    What scientists think

    Scientists disagree: Rain washes lawn fertilizer and manure into streams, wastewater plants release treated water into rivers, and air pollution drops nitrogen onto land and water. Stream gauges and water samples track these nutrients downstream to the Bay.

  3. Once an ecosystem is damaged, nothing can be done.

    Scientists disagree: In Virginia’s Great Wicomico River, researchers built oyster reefs starting in 2004, and by 2009 they estimated about 185 million oysters there. Underwater grass has also partly come back. Recovery is real, but slow and usually partial.

    What scientists think

    Scientists disagree: In Virginia’s Great Wicomico River, researchers built oyster reefs starting in 2004, and by 2009 they estimated about 185 million oysters there. Underwater grass has also partly come back. Recovery is real, but slow and usually partial.

Explore: design a cleanup for a watershed

You get a budget for a watershed that drains to the Bay and spend it on five fixes: forest buffers, cover crops, wastewater plant upgrades, oyster reefs and stormwater ponds. Each fix has a cost and a nitrogen effect. The simulation sketches the summer oxygen and seagrass response in relative units; real responses often lag by years.

Watershed fix designer — spend a budget, read the Bay⚙ original · interactive

Budget: 10 units. Drag a slider to spend on a fix, or press “All in”. Move several sliders to split the budget.

Spent 0 of 10 units
Show the Bay:
In this sketch (relative units)StartEarly yearsMany years later
Nitrogen load100100
Low-oxygen bottom water, summer100100100
Underwater grass202020

Load = 100 − 0 = 100

No money spent yet. The nitrogen load stays at 100, so the low-oxygen zone and the grass stay as they are.

In this sketch: costs, cuts and responses are made-up relative units that show the logic, not measurements of any real place. Land limits how much buffers and cover crops can take. Low-oxygen water falls in step with the nitrogen load. Grass starts at 20 and rises 2 for every 1 the load falls, up to 100. Early years show 40% of the final change. Warming and weather are left out.

Rule to keep: less nitrogen feeds fewer algae, so decomposers use less oxygen and more light reaches the grass, and real responses can lag by years.

Try this.

  1. Predict which single fix lowers nitrogen most for its cost. Spend the whole budget on it.
  2. Split the same budget across three fixes. Predict better or worse, then test it.
  3. Spend only on oyster reefs. Predict the change in nitrogen load, then check.

Explain: how extra nutrients use up oxygen

  • watershed
  • runoff
  • nutrient
  • eutrophication
  • dissolved oxygen
  • decomposer
  • hypoxia
  • riparian forest buffer
  • submerged aquatic vegetation
  • restoration
  • criteria
  • constraints

A watershed is all the land that drains into one river, lake or bay. The Bay’s watershed covers parts of six states and Washington, D.C. In Virginia, the Potomac (fed by the Shenandoah), Rappahannock, York and James drain to the Bay.

Runoff is rainwater that flows over the ground instead of soaking in, carrying what it picks up. A nutrient is a substance living things need to grow; here, that means nitrogen and phosphorus. Dissolved oxygen is oxygen gas mixed into water, measured in milligrams per liter (mg/L). Fish, crabs and oysters take it in through their gills.

Here is the chain, step by step:

  1. Runoff, wastewater and air pollution carry extra nutrients into the Bay.
  2. Algae grow fast. A sudden, thick growth of algae is an algal bloom.
  3. The green water blocks sunlight from underwater grasses.
  4. The algae die and sink to the bottom.
  5. A decomposer is a living thing that breaks down dead matter. Bacteria decompose the dead algae and use oxygen as they do.
  6. Bottom water runs low on oxygen, a state called hypoxia. Animals that can swim away leave; others may sicken or die.

Eutrophication is the enrichment of water with nutrients, which feeds too much algae growth and can lead to oxygen loss.

extra nutrients → algal bloom → algae die and sink → bacteria decompose them and use oxygen → low-oxygen bottom water

The fertilizer never takes oxygen itself; living things use it.

Why the deep channel, and why summer? Oxygen enters water from the air and from photosynthesis in sunlit water. In summer, fresh river water floats on saltier, heavier seawater, and the layers mix poorly, so little new oxygen reaches the bottom. Warm water also holds less dissolved oxygen. Shallow, well-stirred water rarely runs as low.

Picture the bottom water as a closed room full of breathers. The analogy breaks because storms can open the door: they mix the layers and bring new oxygen down.

AI-generated illustration: a side cut-away from a farm field to the Bay's deep channel. Runoff flows off the field, a thick green layer of algae covers the surface, dead algae sink, bacteria cover them on the bottom, a pale fresh layer floats over dark bottom water, and a blue crab swims out of the dark water. Six numbered circles mark the steps.
  1. runoff
  2. algal bloom
  3. dead algae
  4. bacteria
  5. fresh river water
  6. hypoxia
  1. runoff
  2. algal bloom
  3. blank
  4. blank
  5. blank
  6. blank

Word bank: bacteria, dead algae, fresh river water, hypoxia

  1. blank
  2. blank
  3. blank
  4. blank
  5. blank
  6. blank
Check your labels
  1. runoff
  2. algal bloom
  3. dead algae
  4. bacteria
  5. fresh river water
  6. hypoxia
How extra nutrients lead to low-oxygen bottom water in summer. Name the six numbered parts in the order of the chain.
Key idea: extra nutrients feed algae, and bacteria decomposing the dead algae use up oxygen in bottom water that layering keeps from mixing.

Explain: people and nature both change ecosystems

An ecosystem’s capacity to support life depends on habitat, light, oxygen and food. People change these on land, in the ocean and in the air, and so do natural events. Large disruptions include eutrophication, climate shifts and catastrophes.

ChangeCauseOne effect
Clearing forest for farms, roads and housesPeopleMore runoff and soil reach streams
Intensive farming with fertilizer and manurePeopleExtra nutrients, some stored in soil and leaking out years later
Releasing chemicals in wastewater and from industryPeopleNutrients; some contaminants can harm wildlife reproduction
Burning fuel in cars and power plantsPeopleNitrogen falls from the air onto land and water
WildfireNature, sometimes peopleStorms afterward wash ash and soil into streams
Drought or floodNatureChanges how much fresh water and nutrient reach an estuary
EarthquakeNatureThe 2002 Denali Fault earthquake in Alaska sloshed a Nevada desert pool, disturbing spawning areas of the Devils Hole pupfish
Climate shift (warming)Nature and peopleWarmer water holds less oxygen

In one computer-model study of the Bay, warming cancelled roughly 6 to 34 percent of the oxygen improvement from cutting nitrogen.

Key idea: human activities and natural events both change habitat, light and oxygen, which can lower how much life an ecosystem supports.

Explain: fixing a watershed by design

Human activity is not always harmful. Restoration is returning a damaged ecosystem toward health.

In 2010, the U.S. Environmental Protection Agency set a limit on the nitrogen, phosphorus and sediment entering the Bay, the Chesapeake Bay TMDL (total maximum daily load). Each state wrote a Watershed Implementation Plan for its share. Tools include:

  • A riparian forest buffer is a strip of trees and shrubs along a stream. It catches runoff before it reaches the water, and roots hold the bank soil in place.
  • Cover crops, planted on fields in winter, hold soil and take up leftover nitrogen.
  • Wastewater plant upgrades remove more nitrogen. A 2022 study linked large drops in city nutrient pollution to them, and found that nitrogen falling from the air declined across the watershed from 1985 to 2019.
  • Oyster reefs: Virginia has rebuilt reefs in the Lafayette, Lynnhaven and Piankatank rivers. Oysters filter particles from water and reefs shelter other animals, but reefs do not replace cutting nutrients.

Submerged aquatic vegetation is underwater grass, usually rooted in shallow bottoms. It shelters young crabs and needs light. A 2018 study found that as nitrogen in Bay water fell, underwater grass regained about 17,000 hectares (roughly 42,000 acres).

AI-generated illustration: a winter field covered with low green cover crops slopes to a stream lined by a strip of trees and shrubs whose roots grip the bank. An inset shows a shallow Bay bottom with an oyster reef and a bed of underwater grass where a young blue crab hides.
Three fixes you can see on the ground: cover crops and a forest buffer hold soil and nutrients on land, and oyster reefs and underwater grass give animals shelter, though reefs do not replace cutting nutrients.

Fixing a watershed is an engineering problem. Criteria are what a solution must achieve, such as cutting a set amount of nitrogen. Constraints are the limits it must work within, such as money, land and time. Nitrogen stored in soil can keep leaking out for years, so you build, measure, compare with a place that got no fix, and refine.

Key idea: cutting nutrients and rebuilding habitat can help an ecosystem recover, and good fixes meet their criteria within real constraints.

Elaborate: read the Bay’s numbers

MeasureYearValueUnitsKind of number
Total yearly hypoxic volume2023199 (± 26)km³·daysmodel estimate
Total yearly hypoxic volume2024497 (± 65)km³·daysmodel estimate
Total yearly hypoxic volume2025462 (± 60)km³·daysmodel estimate
Nitrogen load to the Bay2009297.1million lb per yearmodel estimate
Nitrogen load to the Bay2025252.7million lb per yearmodel estimate
Nitrogen goalgoal in the 2026 progress release219.5million lb per yeartarget, not a measurement
Underwater grass, areas mapped in both years202476,835acresaerial mapping
Underwater grass, areas mapped in both years202582,968acresaerial mapping
Lafayette River restored reefs beating oyster targets20222 of 3reefs surveyedfield survey

Hypoxic volumes are from the Virginia Institute of Marine Science (VIMS) Chesapeake Bay Environmental Forecast System historical table (read October 2026). They come from a whole-Bay model of water below 2 mg/L added up day by day; 1 km³·day is one cubic kilometer of hypoxic water lasting one day. A separate VIMS recent-years table gives different values for the same years, so compare only numbers from one table. Nitrogen numbers are from the Chesapeake Bay Program’s 2026 progress release (whole-watershed model). Grass areas are from the VIMS 2025 preliminary survey. Reef results are NOAA Fisheries’ report of VIMS monitoring.

  1. How much did the modeled nitrogen load fall from 2009 to 2025? What percent of the 2009 load is that, and how much more must it fall to reach the goal?
  2. Nitrogen loads fell, yet 2024’s hypoxic volume was about two and a half times 2023’s. Name two other things that could explain this.
  3. Why compare grass only in areas mapped in both years?

Claim, evidence, reasoning

Make a claim that answers the essential question: how do human actions change the Bay, and can we do anything about it? Use this data.

Start with: The data show that people blank the Bay, and that blank.

Start with: Modeled nitrogen loads fell from blank to blank million pounds per year, underwater grass in matched areas went from blank to blank acres, and blank of 3 surveyed reefs beat their targets.

Start with: Less nitrogen feeds blank algae, so decomposers use up blank oxygen and more light reaches blank.

Compare with a model answer

The data show that people change the Bay and that cutting pollution can help it recover. Modeled nitrogen loads fell from 297.1 million pounds per year in 2009 to 252.7 in 2025, about 15 percent. In areas mapped in both years, underwater grass grew from 76,835 acres in 2024 to 82,968 in 2025, and 2 of 3 surveyed Lafayette River reefs beat their oyster targets. Less nitrogen feeds fewer algae, so decomposers use less oxygen and more light reaches the grass. One limit: hypoxic volume rose from 2023 to 2024, so three years of model estimates cannot show a trend, and one year of grass data cannot prove what caused the gain.

Design problem

Does a strip of plants between a field and a stream reduce the nitrogen in runoff? Plan a fair test with trays of soil, and say how you would refine it if the result is unclear.

One way to do it

Set up six identical trays of the same soil, tilted to the same angle. Three get a strip of grass sod at the low end, the buffer. Three stay bare, the control.

  • Independent variable: buffer strip or no buffer strip.
  • Dependent variables: nitrate in the runoff (mg/L, from aquarium test strips) and runoff volume. Together they show how much nitrate left each tray.
  • Constants: soil, slope, the amount of dilute plant fertilizer on each tray, the water poured and the waiting time.
  • Repeated trials: three trays of each kind, repeated on a second day. Compare means.
  • Safety: wear gloves and goggles, never taste the water, wash your hands, and dispose of runoff as your teacher directs.

Lower mean nitrate and runoff from buffer trays on both days supports the buffer. If results overlap, refine: widen the strip, add trays, or try another plant. Trays are a model, not a stream, and a real buffer has a constraint: the farmland it takes.

Evaluate: check your thinking

The summer dead zone starts with nutrients, not a chemical that grabs oxygen. Nutrients from farms, lawns, wastewater and air feed algae; the algae die and sink, and bacteria use up oxygen decomposing them, while layered summer water keeps new oxygen from the bottom. People add many of those nutrients, so people can cut them, and Virginia’s buffers, upgraded plants, reefs and returning grass show that recovery is possible, though slow.

Science practices you used: asking a question about a Virginia problem, planning a fair test with a control and repeated trials, reading a data table and calculating a percent change, using a model and naming its limits, and making a claim from evidence.

How we measure it

Dissolved-oxygen profiling

A sensor lowered on a cable reads dissolved oxygen, temperature and salinity at each depth. Readings repeated at many places and dates show where and when bottom water runs low on oxygen, and they are used to check computer models of the Bay.

Aerial and satellite mapping of underwater grass

Pictures taken from aircraft and satellites show where beds of underwater grass grow, and the area of each bed is measured from the images. Comparing only areas mapped in both years keeps a gap in the pictures from looking like lost grass.

Stream gauging with water sampling

A stream gauge measures how much water flows past a point, and water samples measure how much nitrogen each liter carries. Together they give a load, the total amount of nitrogen a river delivers over a year.

Finish line

Test yourself

8 questions

Practice and MCAT-style, with explained answers.

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