Cell Biology · Unit 5: Cells in tissues

Adhesion and the Extracellular Matrix

Cells in a tissue hold on to two things: each other, through cadherins, and the matrix around them, through integrins. This lesson follows each chain from outside the cell to the cytoskeleton, takes the matrix apart into its working parts, and weighs the evidence that some of these links respond to force. Afterwards you can read an attachment or aggregation assay, correct it for background, and say what it does and does not prove.

Watch first Two Grips, Each Wired to a Cable · 2:51

Take the calcium out of the fluid around a sheet of cultured epithelial cells and the cells round up and let go of one another. Put the calcium back and they knit together again.

The calcium is not glue. It stiffens the outer arms of a family of adhesion proteins called cadherins, so that the arm on one cell can grip the arm on the next. That is one of two ways a cell in a tissue holds on. The other is to grip the extracellular matrix (ECM), the woven material that cells secrete into the space around them. Both grips continue inside the cell, onto the cytoskeleton, so a pull on the outside reaches the cell’s own filaments. This lesson follows each chain, takes the matrix apart, asks which links feel force, and then reads the kind of experiment that identified them.

Two ways to hold on: cadherins and integrins

Cell to cell. A classical cadherin crosses the plasma membrane once. Its outer part is a chain of repeated domains with calcium ions bound at the joints, and it binds the same kind of cadherin on the neighbouring cell. Binding to one’s own kind is called homophilic. These contacts gather at adherens junctions, belts of cadherin that circle the top of an epithelial cell (the lesson on epithelia builds the full sheet).

Inside, the chain runs like this. β-catenin binds the cadherin’s cytoplasmic tail directly. β-catenin recruits αE-catenin, which couples the junction to actin filaments. A third protein, p120-catenin, binds the tail close to the membrane, the juxtamembrane region, and helps keep the cadherin at the surface. Picture a rope (the cadherin) tied through a wall to a hook (β-catenin), with a second line (α-catenin) running from the hook to the cell’s internal cables.

β-Catenin has a second job. Outside junctions it is also the transcriptional co-activator of the Wnt pathway, covered in the Wnt lesson. The same protein serves adhesion and gene control, and cells regulate how much goes to each.

Cell to matrix. Integrins are the main matrix receptors. Each is a heterodimer, one α subunit paired with one β subunit. Vertebrates have 18 α and 8 β subunits, which pair into 24 different integrins, each with its own preferred ligands. Many recognise a short sequence, Arg-Gly-Asp (RGD), found in fibronectin and several other matrix proteins.

Inside the cell, talin binds the integrin’s β tail and links it to actin; vinculin binds talin and actin and reinforces the link. In cultured cells these complexes gather into focal adhesions, plaques at the cell’s underside where integrins hold the matrix. Crawling cells make and break them constantly (see migration and cilia), and the signals they send through Rho GTPases belong to integrins and Rho GTPases.

The exception. Not every integrin reaches actin. In hemidesmosomes, which pin the basal cells of epithelia such as skin to their basement membrane, integrin α6β4 binds laminin-332 outside the cell and connects through plectin to keratin intermediate filaments. Two chains with the same overall shape end on different cables.

Not every cell-cell contact needs calcium either. The Chinese hamster V79 cells that Masatoshi Takeichi studied in 1977 had both a calcium-dependent and a calcium-independent mechanism.

What the matrix is made of, and what each part does

Think of the ECM as reinforced concrete: steel cables for pulling, filler for pushing, and a mesh that holds it together. Each component maps onto one of those jobs.

  • Fibrillar collagens are built from three chains wound into a triple helix (the structure is in protein 3D structure). The helices pack side by side into fibrils, and their arrangement gives bone and tendon their strength under tension. Cells secrete them as soluble precursors and trim them outside, a route traced in the secretory pathway.
  • Elastic fibres let tissues such as artery walls and lung stretch and recoil.
  • Fibronectin forms fibrillar networks that cells grip through integrins, and the network also binds growth factors and other signalling molecules.
  • Basement membranes are thin sheets under every epithelium. Their main noncollagenous proteins are laminins, and their scaffold is type IV collagen, which forms networks rather than cables.
  • Proteoglycans are core proteins carrying long glycosaminoglycan chains, sugar polymers studded with negative charges (see carbohydrates). They draw in water and form hydrated gels that help a tissue such as cartilage resist compression. Hyaluronan, a very long glycosaminoglycan without a protein core, helps keep the matrix hydrated.

The matrix is also a store. Growth factors held in it can be released when the matrix is cut or pulled. Latent TGF-β, held in the matrix until it is freed, is the standard example (see TGF-β and Smads). Neurons use basal lamina too: the agrin that organises the neuromuscular junction is deposited there.

Adhesions that feel force

A cell pulls on its adhesions with myosin II. Do the links themselves respond? Two kinds of evidence say some can, and a third says force is not always required.

Talin unfolds. The talin rod is a stack of 13 helical bundles. In 2009 Armando del Rio and colleagues stretched a purified rod fragment at 12 piconewtons (pN) and saw fluorescent vinculin-head binding events rise from one at most to as many as three. The reading is that force unfolds bundles and exposes vinculin sites hidden inside them. Magnetic-tweezer work on the mouse talin1 rod in 2016 found bundles unfolding and refolding at a few piconewtons, and a model built on those rates suggests the rod can act as a force buffer.

Cadherin-catenin-actin bonds can hold longer under load. In 2014 Craig Buckley, Jiongyi Tan and colleagues held a reconstituted complex, built with zebrafish αE-catenin and β-catenin, against an actin filament in an optical trap. A subpopulation of bonds lasted up to 25 seconds at 5 to 10 pN, and a two-state catch-bond model fit the force-lifetime data better than the alternatives tested. A catch bond lives longer as force rises, over a limited range; beyond it, more force breaks it faster, like any bond. And 25 s is the long tail, not the typical lifetime.

Force is not always needed. In 2020 Paul Atherton, Christoph Ballestrem and colleagues anchored talin or vinculin to the outer surface of mitochondria in mouse NIH3T3 fibroblasts. Full-length wild-type proteins did not recruit each other. Releasing autoinhibition, the folded-shut state that hides each protein’s binding sites, let them associate, even with myosin II blocked by blebbistatin.

These results fit together if you keep their systems apart. Purified fragments show that force can expose sites. A cell assay shows that activation can do it without force. Neither tells you which route dominates in a given adhesion in a tissue. And a few piconewtons on one molecule is not the traction a whole cell exerts.

Substrate mechanics also bias cell behaviour in culture. Engler, Sen, Sweeney and Discher found in 2006 that naive mesenchymal stem cells on soft, brain-like gels drifted toward neuronal-like cells and on rigid, bone-like gels toward bone, and that blocking myosin II removed the effect. In 2024 Qiao and colleagues varied how fast gels relax under strain while holding initial stiffness fixed, and greater relaxation favoured astrocytes from rat and mouse neural stem cells. Both are culture systems.

Reading adhesion assays

The classic evidence for these receptors came from three kinds of experiment. A dissociation and reaggregation assay separates cells with a chosen treatment and measures re-clumping. An attachment assay counts cells that stay on a coated well after washing. An antibody-blocking version adds an antibody against a candidate receptor. Here is how to read one.

Worked problem (made-up data). Wells are coated with fibronectin or with bovine serum albumin (BSA) only, a protein cells do not grip. Each well gets 20,000 fibroblasts. After 30 minutes and a standard wash, the retained cells are:

  • fibronectin, no antibody: 14,000
  • fibronectin plus isotype-control antibody (same antibody class, irrelevant target): 13,600
  • fibronectin plus integrin-blocking antibody: 3,200
  • BSA only: 1,000

Viability is above 95% in every well, so lost cells were not dead cells.

Adhesion assay: read the wells⚙ original · interactive
Choose a well

Subtract the BSA background from both wells, then compare the blocking well with the isotype-control well, not with the well that has no antibody. Lower attachment shows the integrin is needed, not that it touches fibronectin. The counts are made-up data.

Step 1: percent attached. 14,000/20,000 = 70%; 13,600/20,000 = 68%; 3,200/20,000 = 16%; 1,000/20,000 = 5%.

Step 2: subtract the background. The BSA well shows cells that stick to plastic or protein nonspecifically. Specific attachment is 13,600 − 1,000 = 12,600 with the isotype control, and 3,200 − 1,000 = 2,200 with the blocking antibody.

Step 3: inhibition.

inhibition = 1 − (blocking well − background) / (isotype well − background)

1 − 2,200/12,600 = 1 − 0.175 = 0.825, or about 83%.

Step 4: why the isotype well. Adding any antibody protein lowered attachment from 70% to 68% here. Comparing with the no-antibody well would credit that 2-point drop to the integrin.

Step 5: what this does not show. An antibody can block by sitting near the receptor, or by bending it. Lower attachment shows the integrin is needed, not that it touches fibronectin. Horwitz and colleagues made that next step in 1985 with purified antigen in equilibrium gel filtration, and the antibody blocked the purified laminin association.

Design problem

Do cadherins sort cells into tissues? Design an experiment in the spirit of Nose, Nagafuchi and Takeichi (1988), using mouse L cells, which have little cadherin of their own.

One way to do it

Make two L-cell lines, one expressing E-cadherin and one expressing P-cadherin. Label them with different dyes, mix them, and let them aggregate in calcium.

Predictions: if any adhesion will do, aggregates contain both colours intermixed. If binding is type-specific and homophilic, each aggregate shows patches of one colour.

Controls: untransfected L cells (little aggregation); aggregation in EGTA, which removes calcium (should fail); a function-blocking antibody for each cadherin (should break up only its own population’s contacts); and matched surface expression, measured by flow cytometry. The last matters because a difference in amount alone can drive sorting, as differential-adhesion arguments predict, so unequal levels would confound the type-specific reading. Score the images with a mixing index, such as the fraction of each cell’s neighbours that share its colour, across many aggregates and independent experiments.

Limit: these are fibroblasts in suspension, not an embryo. The result shows cadherins can sort cells; whether they do in a tissue needs work in the embryo itself, such as the cadherin changes that accompany neural crest cells leaving the neural tube.

How we measure it

Dissociation and reaggregation

Cells are separated with a chosen treatment (EDTA, trypsin with calcium, trypsin with EDTA), then shaken together and counted as they form clumps. Which treatments spare aggregation, and whether calcium is needed during re-aggregation, separates one adhesion mechanism from another.

Attachment assay with a function-blocking antibody

A known number of cells is put into wells coated with a matrix protein, unbound cells are washed off, and the rest are counted. An antibody that lowers the count, compared with a control antibody, implicates its target in attachment but does not show direct binding.

Equilibrium gel filtration

A purified receptor runs through a gel filtration column pre-equilibrated with its ligand, so a complex that falls apart and re-forms quickly stays occupied throughout. A complex that runs larger than the receptor alone is evidence of direct association.

Single-molecule force spectroscopy

One protein or one complex is held between a surface and a bead in magnetic tweezers or an optical trap and pulled with a known force of a few piconewtons. It shows whether domains unfold, binding sites open, or a bond lasts longer under load.

Finish line

Test yourself

8 questions

Practice and MCAT-style, with explained answers.

Next · Lesson 23

Epithelia and Tissue Organization

The gut lining is one cell thick. How does it move glucose one way and keep the gut contents out?

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